PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753753.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 212aa MW: 24337.9 Da PI: 6.4034

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	8.8e-08	11	57	3	46
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqk 46 +W+ d+l+ +a ++ + +W++Ia+ ++ g+++ +++ ++ + XP_022753753.1 11 SWSWHQDKLFERALVMFTDEespdRWEKIAAQVP-GKSAMEVRKHYED 57 7***************99**********.********976 PP
2	Myb_DNA-binding	43.3	8.2e-14	113	157	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r Rt+ q+ s+ qky XP_022753753.1 113 PWTAEEHRLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKY 157 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MIRTNNDFGS SWSWHQDKLF ERALVMFTDE ESPDRWEKIA AQVPGKSAME VRKHYEDLEH 60 DVMEIEAGRV ELPSYEGELE SMSWVNESGD CQVWSGPKGK ERERENERRK GVPWTAEEHR 120 LFLIGLQKYG KGDWRSISRN AVVSRTPTQV ASHAQKYFLR LNSINKKDKR RSSIHDTTTA 180 DCDNCTDQNG VGTKGDQGSS FGNNHGFQFP LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-54	MYB family protein