PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753790.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 408aa MW: 45221.9 Da PI: 8.2871

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.5e-07	234	256	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_022753790.1 234 HYCQVCGKGFKRDANLRMHMRAH 256 68*******************99 PP
2	zf-C2H2	10.6	0.0018	330	353	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_022753790.1 330 YVCKRCNsKQFSVLSDLRTHEKHC 353 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MMSGSASCFP NASQGLQMYP VAAEDIVSSS LEADGSGPGA HSSSLVYYLS ILKDKVHQVQ 60 SLVSVLISPD QTHPESTSLA MASMGSLVQE IIVTASSMTF ICQQMSLGTT SGNNSTTDQL 120 HQQHVRVIPD NGISQPPNFT NNCVGNIVQE RSGQGFYSSS ETISWYGDHC NNFNNNNNNS 180 NRNLQVRNDD KLERKELAKL TRRSEITEGS QGISAKNYDI VEVDAADILA KYTHYCQVCG 240 KGFKRDANLR MHMRAHGDEY KTTAALTNPM KNHEESTTEV GNGSTKLLPK KYSCPQEGCR 300 WNQKHAKFQP LKSMICVKNH YKRSHCPKMY VCKRCNSKQF SVLSDLRTHE KHCGDLKWQC 360 SCGTTFSRKD KLMGHVALFV GHSPVATNSL INPGKLEHQA TTMQLDDR

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MMSGSASCFP NASQGLQMYP VAAEDIVSSS LEADGSGPGA HSSSLVYYLS ILKDKVHQVQ  60
SLVSVLISPD QTHPESTSLA MASMGSLVQE IIVTASSMTF ICQQMSLGTT SGNNSTTDQL  120
HQQHVRVIPD NGISQPPNFT NNCVGNIVQE RSGQGFYSSS ETISWYGDHC NNFNNNNNNS  180
NRNLQVRNDD KLERKELAKL TRRSEITEGS QGISAKNYDI VEVDAADILA KYTHYCQVCG  240
KGFKRDANLR MHMRAHGDEY KTTAALTNPM KNHEESTTEV GNGSTKLLPK KYSCPQEGCR  300
WNQKHAKFQP LKSMICVKNH YKRSHCPKMY VCKRCNSKQF SVLSDLRTHE KHCGDLKWQC  360
SCGTTFSRKD KLMGHVALFV GHSPVATNSL INPGKLEHQA TTMQLDDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-109	C2H2 family protein