PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753840.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 254aa    MW: 29513.4 Da    PI: 7.9717
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.4e-101057147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47
                     +g+WT+ Ed llv+ v+++G ++W+ Ia+  g    R  ++ ++rw +y
   XP_022753840.1 10 KGPWTEHEDILLVNFVHLFGDRRWDFIAKVSGlkVWRETND-RLRWVNY 57
                     79****************************99887777776.7777777 PP
2Myb_DNA-binding55.51.3e-1764109148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_022753840.1  64 RGKMTPQEERLVLELHSKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 109
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MKMVKDEIRK GPWTEHEDIL LVNFVHLFGD RRWDFIAKVS GLKVWRETND RLRWVNYLHP  60
GLKRGKMTPQ EERLVLELHS KWGNRWSKIA RKLPGRTDNE IKNYWRTHMR KKAQEKKRAM  120
SPSSSSSVCH PSPSTSTKVD SLPFSGTGKV SFYDTGGPDM ASLAGKKSPE FEDEKGYPMD  180
EIWKDFDLYE ENTMISLSDN YSEGCNFSCP SMASPPWEYL WDSLWKMDEE ESKMFLPTNQ  240
FLSCTEYGKA SLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.33e-87MYB family protein