PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753841.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 220aa    MW: 25388.6 Da    PI: 6.1475
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.2e-171075148
                     TSSS-HHHHHHHHHHHHHTTTT...................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...................tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed llv+ v+++G +                   +W++Iar+++ gRt++++k++w++++
   XP_022753841.1 10 KGPWTEHEDILLVNFVHLFGDRrwdfiakvsglkvwretndRWSKIARKLP-GRTDNEIKNYWRTHM 75
                     79*************************************************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MKMVKDEIRK GPWTEHEDIL LVNFVHLFGD RRWDFIAKVS GLKVWRETND RWSKIARKLP  60
GRTDNEIKNY WRTHMRKKAQ EKKRAMSPSS SSSVCHPSPS TSTKVDSLPF SGTGKVSFYD  120
TGGPDMASLA GKKSPEFEDE KGYPMDEIWK DFDLYEENTM ISLSDNYSEG CNFSCPSMAS  180
PPWEYLWDSL WKMDEEESKM FLPTNQFLSC TEYGKASLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.35e-56MYB family protein