PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753870.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 349aa    MW: 37748.9 Da    PI: 7.784
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.42e-18264298135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C +tkTp+WR gp g+ktLCnaCG++yr+ +l
  XP_022753870.1 264 CMHCEVTKTPQWRAGPMGPKTLCNACGVRYRSGRL 298
                     99*****************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MNNSWFDKSF DGVSDDFFDD VIKYLDFPLE SDEGTDGGGS GGEGVTKDFH LPLDDVEENN  60
GGGGGDDDGD GEEWDCNFQN LEPPPANVLA GLSSGFYGDF FNDSLAKNHT VSCDGSSQLN  120
QQSSTTKASS SRSITLHSEA ADIKGSIRFQ TSSPVSVLES SSSCSAANAT PVNPKLSFLV  180
KRSRSNRRRA STFNLQFAVS FLSSTSSTSR GSNSLVGSES ESESFLTDKP AKKRQKKKKN  240
LTLLSGSTEI NKSTSQQPII VRRCMHCEVT KTPQWRAGPM GPKTLCNACG VRYRSGRLLP  300
EYRPAASPTF VPSLHSNSHK KVVEMRKIGK LLMAVRPSML SNPPEKSFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.23e-40GATA family protein