PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753905.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YB
Protein Properties Length: 183aa    MW: 19531.8 Da    PI: 6.5207
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.39.6e-5828123297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk+lPanakisk+aketvqecvsefisf+t+easdkcq+ekrktingddllwa++tlGfe+yveplkvyl+++re+ege
  XP_022753905.1  28 KEQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 122
                     79********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_022753905.1 123 K 123
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MADSDSESGG AQNNASNATG NSELSSPKEQ DRFLPIANVS RIMKKALPAN AKISKEAKET  60
VQECVSEFIS FITGEASDKC QKEKRKTING DDLLWAMTTL GFEEYVEPLK VYLQRFREME  120
GEKTAVAREK DAPLAGGVGG SGSGMYGMMV HQHQGHVYGS SGFHQMGSGL GKGGPGNNLG  180
GPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-71NF-YB family protein