PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753910.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 566aa MW: 60753.1 Da PI: 7.1117

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.7e-32	220	277	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_022753910.1 220 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 277 8**************************************.*************85 PP
2	WRKY	106.3	1.6e-33	383	441	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022753910.1 383 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 441 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MVMEEQMLAS SSAAAAAAAN AQQDLSGSAG SGGARYKLVA PSKLPISRST CITIPPGLSP 60 SSFLESPVLL SDVKAEPSPT TGSLIKPQAV HASGASSTYS ATAVCSNAFD ERNPSCFEFR 120 PHPRSNMAPA DLNHQRSEQS LPVQGQYPTI SFNSSASVKS EMAGSSSELS LSVPVHTATS 180 VAGAPAEVDI DELNQIGNPN SGLQSGQSDH RGGGPSVSSD DGYNWRKYGQ KHVKGSEFPR 240 SYYKCTHPNC EVKKLFERSH DGQITEIIYK GTHDHPKPQP SRRHSSGNIM SGQEDSSDKV 300 SSLNGRDDKS SSMYGQTAHI IEPNSTADLL PVTANDDNVD EVDDDDPFSK RRKMDGGVDI 360 TPVVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT NAGCPVRKHV 420 ERASHDPKAV ITTYEGKHNH DVPTARSSSH DKAGPVAVNG SSRIRSEENG AISLDLGVGI 480 CSAPESSSNK HRQFHSELGQ SHPLTGGSSF KLNQASPMTA YYGVLNGGMN LYGFRENPNE 540 GRGVEITHLN YSHAFPQSIG RILTGP

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MVMEEQMLAS SSAAAAAAAN AQQDLSGSAG SGGARYKLVA PSKLPISRST CITIPPGLSP  60
SSFLESPVLL SDVKAEPSPT TGSLIKPQAV HASGASSTYS ATAVCSNAFD ERNPSCFEFR  120
PHPRSNMAPA DLNHQRSEQS LPVQGQYPTI SFNSSASVKS EMAGSSSELS LSVPVHTATS  180
VAGAPAEVDI DELNQIGNPN SGLQSGQSDH RGGGPSVSSD DGYNWRKYGQ KHVKGSEFPR  240
SYYKCTHPNC EVKKLFERSH DGQITEIIYK GTHDHPKPQP SRRHSSGNIM SGQEDSSDKV  300
SSLNGRDDKS SSMYGQTAHI IEPNSTADLL PVTANDDNVD EVDDDDPFSK RRKMDGGVDI  360
TPVVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT NAGCPVRKHV  420
ERASHDPKAV ITTYEGKHNH DVPTARSSSH DKAGPVAVNG SSRIRSEENG AISLDLGVGI  480
CSAPESSSNK HRQFHSELGQ SHPLTGGSSF KLNQASPMTA YYGVLNGGMN LYGFRENPNE  540
GRGVEITHLN YSHAFPQSIG RILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein