PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753920.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 574aa MW: 63287.4 Da PI: 7.2922

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3.1e-30	337	395	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ XP_022753920.1 337 SDGCQWRKYGQKIAKGNPCPRAYYRCTMAtGCPVRKQVQRCADDRTILITTYEGNHNHP 395 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MDKGARLSFD AADATATACF HLKQSLFGIE PFGKSYKTFA WKQAFMDPVD NQHVSDLVQD 60 GKRVVNEMDF FARDHRSSKE QVEADDVKIE SEHHGLVQGN NEPAADVNTG LNLLTTSTAS 120 EKPVSDDRTS QNLKEKQRAN QLADIRAELE RINAENQRLR VTLNQVNSNY CALQMHLVSL 180 MQRQQNQSAE SSEATKLNRP MEEKRHGEAI VARQFMDLGQ AAKAKNDELS ESSSEGRFQE 240 LSGSPGNTIV ESMERRQKNS TSRNETVPSD SSRKDLMDPG RNQREDTPEG RPHPGWFSNK 300 VPKFNSSRDV EQAQETMAMI RKARVSVRAR SEASMISDGC QWRKYGQKIA KGNPCPRAYY 360 RCTMATGCPV RKQVQRCADD RTILITTYEG NHNHPLPPAA MAMASTTSAA ASMLLSGSMN 420 SADGIMNSNI LPKGMFPACS PNLVTLSASA PFPTVTLDLT YTPNQRPLNQ VHPNWPHNIS 480 SLPHLLGHPI YNQPKLLGLL SSQGIEHNHL AQNQTRAHSM ADTAATAAAI TADPNFTAAL 540 MAAITSIISN SHRDNSGNNN NDSTTSRDTE DNNT

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MDKGARLSFD AADATATACF HLKQSLFGIE PFGKSYKTFA WKQAFMDPVD NQHVSDLVQD  60
GKRVVNEMDF FARDHRSSKE QVEADDVKIE SEHHGLVQGN NEPAADVNTG LNLLTTSTAS  120
EKPVSDDRTS QNLKEKQRAN QLADIRAELE RINAENQRLR VTLNQVNSNY CALQMHLVSL  180
MQRQQNQSAE SSEATKLNRP MEEKRHGEAI VARQFMDLGQ AAKAKNDELS ESSSEGRFQE  240
LSGSPGNTIV ESMERRQKNS TSRNETVPSD SSRKDLMDPG RNQREDTPEG RPHPGWFSNK  300
VPKFNSSRDV EQAQETMAMI RKARVSVRAR SEASMISDGC QWRKYGQKIA KGNPCPRAYY  360
RCTMATGCPV RKQVQRCADD RTILITTYEG NHNHPLPPAA MAMASTTSAA ASMLLSGSMN  420
SADGIMNSNI LPKGMFPACS PNLVTLSASA PFPTVTLDLT YTPNQRPLNQ VHPNWPHNIS  480
SLPHLLGHPI YNQPKLLGLL SSQGIEHNHL AQNQTRAHSM ADTAATAAAI TADPNFTAAL  540
MAAITSIISN SHRDNSGNNN NDSTTSRDTE DNNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-103	WRKY family protein