PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753961.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 352aa MW: 39543.2 Da PI: 8.311

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.3e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g++R++k+c++rw +yl XP_022753961.1 14 KGPWTAEEDQKLIDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ eE+e +++++ lG++ W+ Ia++++ gRt++++k++w++ XP_022753961.1 67 RGKFSIEEEETIIQLHSVLGNK-WSVIAARLP-GRTDNEIKNYWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGNPPCCDKN GLKKGPWTAE EDQKLIDYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY 60 LRPDIKRGKF SIEEEETIIQ LHSVLGNKWS VIAARLPGRT DNEIKNYWNT RIKKKLLRMG 120 IDPVTHSPRL DLLELSSLLS SSLYNSSQLN PSGLHGIGSI FNPNFLNLAT ALLSSQNKNL 180 EISNTPENVQ QNQTGNFQCQ NQYESYQGNQ VQNPIQACTQ LLQANLNHVS TNPTSLNTPP 240 NLWQEYDREN IIVSNSKGFF PMQNYGYHDS NQSIINSLAD QNQACFSENI INMSPFGSLL 300 STPSSSSTPL NSSSTTYVNN NGRNTEDIER DSYCRNTLMF DVPNGLNVNG CA

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGNPPCCDKN GLKKGPWTAE EDQKLIDYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY  60
LRPDIKRGKF SIEEEETIIQ LHSVLGNKWS VIAARLPGRT DNEIKNYWNT RIKKKLLRMG  120
IDPVTHSPRL DLLELSSLLS SSLYNSSQLN PSGLHGIGSI FNPNFLNLAT ALLSSQNKNL  180
EISNTPENVQ QNQTGNFQCQ NQYESYQGNQ VQNPIQACTQ LLQANLNHVS TNPTSLNTPP  240
NLWQEYDREN IIVSNSKGFF PMQNYGYHDS NQSIINSLAD QNQACFSENI INMSPFGSLL  300
STPSSSSTPL NSSSTTYVNN NGRNTEDIER DSYCRNTLMF DVPNGLNVNG CA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-90	MYB family protein