PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753996.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 179aa    MW: 21151.8 Da    PI: 9.1443
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.88e-181467356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++++++eq++ Le+ F  n+++  e + +LA++lg++ rqV +W+qN+Ra++k
  XP_022753996.1 14 NKRRLNQEQVRLLEKSFSANKKLEPELKLHLANQLGVPPRQVAIWYQNKRARWK 67
                    67799************************************************9 PP
2HD-ZIP_I/II1093.3e-3514105293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krrl++eqv+lLE+sF++++kLepe K +la++Lg+ prqva+W+qn+RAR+kt+ lE dy++L+ ++++  +e++rLek+v+ L+eel++
  XP_022753996.1  14 NKRRLNQEQVRLLEKSFSANKKLEPELKLHLANQLGVPPRQVAIWYQNKRARWKTQSLELDYNTLQVKLENALSEKRRLEKDVKYLQEELRK 105
                     79**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDFQSQKLCS AKHNKRRLNQ EQVRLLEKSF SANKKLEPEL KLHLANQLGV PPRQVAIWYQ  60
NKRARWKTQS LELDYNTLQV KLENALSEKR RLEKDVKYLQ EELRKAQWMM FAMNNQRDNH  120
HHHQYHQHHH PPNFVSCNST GSSEGGSSSF HENTVHDHEI LQIDELYACL VGADRSTWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.15e-41HD-ZIP family protein