PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754055.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 428aa MW: 47951.8 Da PI: 7.385

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	362	407	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ +k + a++L +Av+YIk+Lq XP_022754055.1 362 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 407 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MESDHQHHYR HLLDYHQPQH HQKQMNSGLM RYQSAPSSYF SNILDRDFCR EFLNRPSSPE 60 TEQIIADFXS SGDAGGDGGN TENISDQNLY TRNSPIRETA VKIEQQTQII TSMNNQTGVM 120 QQQQQQQGKY SSASQNFYQS QTQQHLPNEQ SSSTMDYRIP NSTGMARPTQ IKMGGGNNNN 180 LIRHSSSPAG LFSNKNIENI AGYGVMRGMG EYGSSNISNR EAVFASASRP PPSGLMSPIA 240 EMENKNMGPN SSENAGFGES RHNNYSSGFP VTCWDDSMII SDNMSDVKRI REDDRSLSGL 300 DLDGAETQNT DTGNRPPPLL AHHLSLPKSP PDMYAIEKFL QNKDSVLCKI RAKRGCATHP 360 RSIAERVRRT KISERMRKLQ DLVPNMDKQT NTADMLDLAV DYIKDLQKQA KTLSDNRAKC 420 SCADKQQQ

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MESDHQHHYR HLLDYHQPQH HQKQMNSGLM RYQSAPSSYF SNILDRDFCR EFLNRPSSPE  60
TEQIIADFXS SGDAGGDGGN TENISDQNLY TRNSPIRETA VKIEQQTQII TSMNNQTGVM  120
QQQQQQQGKY SSASQNFYQS QTQQHLPNEQ SSSTMDYRIP NSTGMARPTQ IKMGGGNNNN  180
LIRHSSSPAG LFSNKNIENI AGYGVMRGMG EYGSSNISNR EAVFASASRP PPSGLMSPIA  240
EMENKNMGPN SSENAGFGES RHNNYSSGFP VTCWDDSMII SDNMSDVKRI REDDRSLSGL  300
DLDGAETQNT DTGNRPPPLL AHHLSLPKSP PDMYAIEKFL QNKDSVLCKI RAKRGCATHP  360
RSIAERVRRT KISERMRKLQ DLVPNMDKQT NTADMLDLAV DYIKDLQKQA KTLSDNRAKC  420
SCADKQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	2e-71	bHLH family protein