PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754083.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YC
Protein Properties Length: 266aa    MW: 30589.7 Da    PI: 9.9001
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC408.6e-131602481199
           NF-YC  11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     +++++ k  ++P+ rik+i+k+++    is ++  ++ ka e f+ ++    +  + e ++++l    ++ +v + + +dfl d vp++
  XP_022754083.1 160 NEEEEAKMFTFPMNRIKRIIKSEDSRMAISQDVVFVVNKATEKFLEQFCEDGYKCSVEDRKKSLSYKHLSMVVCERKRYDFLSDYVPEK 248
                     3456778899**************9999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAVDFVKIKR LGMPYLIHDN RNSHVLSITE QSLAGLRPIM HVGKTGQMVD LEIGVAHNKW  60
NVQGASKVRF LRRFNFQVNQ NIGGEERKTG QESQYPKKPN KSKPKADNNK NKSSNGTLVE  120
SEVIADPSSN TESREQENGN KTNKNVKPNK RKRKEKVEEN EEEEAKMFTF PMNRIKRIIK  180
SEDSRMAISQ DVVFVVNKAT EKFLEQFCED GYKCSVEDRK KSLSYKHLSM VVCERKRYDF  240
LSDYVPEKIK AEDALKEKNL TETEAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151156RKRKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.15e-33NF-YC family protein