PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754107.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 170aa    MW: 19608.2 Da    PI: 5.4744
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.79.4e-212975248
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    + e+ks+rqvtfs Rr g++ KA+ELS+LC++ev ++ +s++g++y+
  XP_022754107.1 29 KLEDKSKRQVTFSERRRGLFNKAKELSTLCGVEVGILTLSKSGRVYT 75
                    679*******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEDNVLMSNA TEAKKTRSSR GRQRIEIKKL EDKSKRQVTF SERRRGLFNK AKELSTLCGV  60
EVGILTLSKS GRVYTNDNVE AVLDRYLAES SGQGNYSWIK QKEVKEDISG GFWLDQPIEN  120
MGLVELLEYA MAFNDLRKNA EPRVEELSIQ KSTYLWQYVA DQELNKDLDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.16e-26M-type_MADS family protein