PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754147.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 191aa    MW: 21915.3 Da    PI: 10.2254
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.11.8e-161053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    r e+   rq  +skR++g+ KKA+EL +LCd++ a+++fs+t+k
  XP_022754147.1 10 RLESMKARQAKYSKRKAGLVKKAKELAILCDVDLALLLFSPTDK 53
                    6789999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MGRRKLKIQR LESMKARQAK YSKRKAGLVK KAKELAILCD VDLALLLFSP TDKPTLFVGQ  60
DKDLSSVVER LSNLTLGERE QRRAYTMKLL KKLYANSNSE DDPTNLSQDS SNSLKLHEDQ  120
LNELKEKLAE KSRILREWKN PNNVEDLSQI KIMEEHLIAS LNRIKNKKSQ LAKELQKRPE  180
GLEGSTVDLE T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.11e-31M-type_MADS family protein