PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754155.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 396aa MW: 45383.7 Da PI: 9.3645

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022754155.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************998 PP
2	QLQ	58.3	2.2e-20	9	43	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+Pp+Ll+ i+ XP_022754155.1 9 PFTASQWQELEHQALIFKYMVSGIPIPPDLLFTIK 43 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MMSGRNRFPF TASQWQELEH QALIFKYMVS GIPIPPDLLF TIKRSCSDSS LSSRLFSRQP 60 QHIGWNFFQM GLGRKVDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VTATTMPNPS TTTPKSSITK THPSSFSSLS SMSLSSSESQ QHHHQLCYLG YHSQVNHPFM 180 YSYAPRPPGI GQSPQENTTH SLFDSSSHSQ TNTDYRRNSY VYGLKKEVDE HAFFSEPSGT 240 MRSFSGSSVD DSWQLTPLTM SSSSSKQRSC TGLQSEYSYL QLQSLTDHNS KQNKLDDKHY 300 CYVLGSDIKC KLEKGEPQKT VHRLFDEWPP KHRDSWLDLD DKSSNSSSVS TTRLSISIPS 360 TSDDFPIFNS RAHNGILNKK KKEKEKELYL CWFFCS

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MMSGRNRFPF TASQWQELEH QALIFKYMVS GIPIPPDLLF TIKRSCSDSS LSSRLFSRQP  60
QHIGWNFFQM GLGRKVDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE  120
VTATTMPNPS TTTPKSSITK THPSSFSSLS SMSLSSSESQ QHHHQLCYLG YHSQVNHPFM  180
YSYAPRPPGI GQSPQENTTH SLFDSSSHSQ TNTDYRRNSY VYGLKKEVDE HAFFSEPSGT  240
MRSFSGSSVD DSWQLTPLTM SSSSSKQRSC TGLQSEYSYL QLQSLTDHNS KQNKLDDKHY  300
CYVLGSDIKC KLEKGEPQKT VHRLFDEWPP KHRDSWLDLD DKSSNSSSVS TTRLSISIPS  360
TSDDFPIFNS RAHNGILNKK KKEKEKELYL CWFFCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-48	GRF family protein