PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754163.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 244aa    MW: 27729.8 Da    PI: 10.2596
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF503.8e-161152344
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                    i n+  r+ t  kR++g++KK +ELS+LC++e++ ii+s++ 
  XP_022754163.1 11 ITNDFARKATNKKRKKGLMKKVSELSTLCGIEACAIIYSPNE 52
                    8999***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MTRQKVKLAY ITNDFARKAT NKKRKKGLMK KVSELSTLCG IEACAIIYSP NESQPEVWPS  60
PVGVQRVLSE FKKLPEMKQN KNMVDQESFL RQRIAKANEQ LQKQCKNNRE KEMKQLMLQN  120
LTGKGLHNLN MMDSNELGWL IEQNLKDINK RVDTLTKASH SQGSAAASSG TMVTPEPKSK  180
SGEKVQAGRS DLEVNMDTMQ RQQRITDLMN PQDHLGFGGD EMMPPFGDNN RNALWSNAFF  240
PREK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-61M-type_MADS family protein