PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754246.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 319aa    MW: 34439.8 Da    PI: 7.8357
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.83.2e-32173229158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  ++rkpylheSRh+hA+rR+RgsgGrF
  XP_022754246.1 173 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VNARKPYLHESRHQHAMRRARGSGGRF 229
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MQSKSEHASQ LEPDSHGVHP TAVFSEPWWG NIGYGAISVG VRGGNASNSS SMECPNGSES  60
KDGQSLSSGG LNEENDVNKE TQTTASSQTV GHGGQEHHNL QPVVSTMPAM RDKCLTQPPQ  120
LELVSYSIAC ASNPYQDPFY GGLMAAYGHQ PLGYPPFVGM PHARMALPNE MAQEPVYVNA  180
KQYQGILRRR QARAKAELEK KVVNARKPYL HESRHQHAMR RARGSGGRFA KKTDADSSKR  240
MAEEKGTGSD PALSSQSASS SGSEPLPTDS AETWNSSLAR QEARGSHVHD AHHVNGSGHY  300
QERSGSISYN QASHRPLAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-86NF-YA family protein