PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754279.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 447aa MW: 49920.7 Da PI: 8.7578

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.3e-10	386	426	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR +i +++ +L++l+P+ +k + a++L +Av+YIk+Lq XP_022754279.1 386 VRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 426 6****************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE 60 TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ 120 TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC 180 NNSNLIRHSS SPAGLFANID IENSVVETKQ KRYLFHGYGV MRGMGDYGSA NSSNRETAFP 240 PASRPPPGLM SPIAEMGNKS MSPNSSENTG FGDNRRNNYS SGFPVTSWDD PVMISDNMSG 300 VKRLGEDDRS LSGLDFDGAE TLNTDTGNHP PPLLAHHLSL PKSSPDMSAI EKFFKFQDSV 360 PRKIRAKRGC ATHPRSIAER FVSIQVRRTK ISERMRKLQD LVPNMDKQTN TADMLDLAVD 420 YIKDLQKQVK SLSDNRAKCS CANRQQQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE  60
TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ  120
TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC  180
NNSNLIRHSS SPAGLFANID IENSVVETKQ KRYLFHGYGV MRGMGDYGSA NSSNRETAFP  240
PASRPPPGLM SPIAEMGNKS MSPNSSENTG FGDNRRNNYS SGFPVTSWDD PVMISDNMSG  300
VKRLGEDDRS LSGLDFDGAE TLNTDTGNHP PPLLAHHLSL PKSSPDMSAI EKFFKFQDSV  360
PRKIRAKRGC ATHPRSIAER FVSIQVRRTK ISERMRKLQD LVPNMDKQTN TADMLDLAVD  420
YIKDLQKQVK SLSDNRAKCS CANRQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-60	bHLH family protein