PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754284.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 431aa MW: 47913.4 Da PI: 8.3686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	365	410	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ +k + a++L +Av+YIk+Lq XP_022754284.1 365 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 410 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE 60 TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ 120 TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC 180 NNSNLIRHSS SPAGLFANID IENIAGYGVM RGMGDYGSAN SSNRETAFPP ASRPPPGLMS 240 PIAEMGNKSM SPNSSENTGF GDNRRNNYSS GFPVTSWDDP VMISDNMSGV KRLGEDDRSL 300 SGLDFDGAET LNTDTGNHPP PLLAHHLSLP KSSPDMSAIE KFFKFQDSVP RKIRAKRGCA 360 THPRSIAERV RRTKISERMR KLQDLVPNMD KQTNTADMLD LAVDYIKDLQ KQVKSLSDNR 420 AKCSCANRQQ Q

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE  60
TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ  120
TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC  180
NNSNLIRHSS SPAGLFANID IENIAGYGVM RGMGDYGSAN SSNRETAFPP ASRPPPGLMS  240
PIAEMGNKSM SPNSSENTGF GDNRRNNYSS GFPVTSWDDP VMISDNMSGV KRLGEDDRSL  300
SGLDFDGAET LNTDTGNHPP PLLAHHLSLP KSSPDMSAIE KFFKFQDSVP RKIRAKRGCA  360
THPRSIAERV RRTKISERMR KLQDLVPNMD KQTNTADMLD LAVDYIKDLQ KQVKSLSDNR  420
AKCSCANRQQ Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-64	bHLH family protein