PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754569.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1049aa MW: 115638 Da PI: 4.7447

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	39	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_022754569.1 39 KGQWTAEEDEILCKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 85 799**************************9.**********986 PP
2	Myb_DNA-binding	64.4	2.1e-20	91	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEdel++++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_022754569.1 91 KGPWSKEEDELIIELVNEFGPKKWSTIAQHLP-GRIGKQCRERWHNHL 137 79****************************.***********97 PP
3	Myb_DNA-binding	46.9	6.2e-15	143	185	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022754569.1 143 KEAWTQEEELALIRAHQIFGNK-WAELTKFLP-GRTDNAIKNHWN 185 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1049 aa Download sequence
MEGDRTVSTP SVGLSISDGA QRMRALHGRT SGPTRRSTKG QWTAEEDEIL CKAVQRFKGK 60 NWKKIAECFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVNEFG PKKWSTIAQH 120 LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNKWAELTK FLPGRTDNAI 180 KNHWNSSVKK KLDSYIASGL LEQFQFPLLK NLSQPVPSSS SRMQSNVDDS GAKCRTEVED 240 LSECSQESTM VGCSQSGGDL TNAAVHTRDQ FHLAEMPGVA KEKNSSPAPC SEEYYPSFED 300 LSFSIPEIPC EAGYSASGDY QFGLTDLPNI SSLELGQESS GLPTYCLDTS ESHEVMNAAF 360 QTSVGLNAPT SFVNMVITSD KPEHMLITDD ECCRVLFSEA VNDGCFASEN FTQGSNVIEL 420 VGCKNMSLSQ ASDIQISETG KTAASQSNCP PRSEALPTSC CQSFLSPSLL SIEDGKHMYG 480 REPSQLTGKP IETQEQEFTK NAHDGFIYTN DDHTDNKDLQ EESYLEKDSV KLVPVNNFGL 540 ESNAVQTCPT VDDKPNLPSV QDVGGLCYGP PRFPSLDMPF FSCDLIPFGS DMQQEYSPLG 600 IRQLMMSSMN CITPFRLWDS PSRDDSPDAV LKSAAKTFTG TPSILKKRHR DLLSPLSERR 660 SDKKLETDMT SSLTEDFSRL DVMFNETGTG NISQVSPAEH KTNSGVSVEE KENLYQAFDR 720 EQENGGDHTE SLDDEAQKKD SNGTNSQRNM KMETCNSDSK DKAEADASDK IVQQHSTVLV 780 ERNLNDLLLF SPDHVGLIAD RPLLSSTIGT PINQYHKSFG AISNRGFASE CLSGNACIVV 840 SSPTLKIKNG EGHSIAVSTV QCTNSSATLE NLVDNAGTNA GIENYNIFGG TPFRRSIESP 900 SAWKSPWFIN SFVPGPRNDT EITIEDIGYL MSPADRSYDA IGLMKQLNEH TAAAYADALE 960 VLGDETPESI VKGRRSNNPK MEKENNQLEV QSHLASNILA ERRILDFSEC GTPGKGTENS 1020 KSSTAISISS PSSYLLKVVE FCVLVWSCC

Sequence ? help Back to Top

Protein Sequence Length: 1049 aa Download sequence

MEGDRTVSTP SVGLSISDGA QRMRALHGRT SGPTRRSTKG QWTAEEDEIL CKAVQRFKGK  60
NWKKIAECFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVNEFG PKKWSTIAQH  120
LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNKWAELTK FLPGRTDNAI  180
KNHWNSSVKK KLDSYIASGL LEQFQFPLLK NLSQPVPSSS SRMQSNVDDS GAKCRTEVED  240
LSECSQESTM VGCSQSGGDL TNAAVHTRDQ FHLAEMPGVA KEKNSSPAPC SEEYYPSFED  300
LSFSIPEIPC EAGYSASGDY QFGLTDLPNI SSLELGQESS GLPTYCLDTS ESHEVMNAAF  360
QTSVGLNAPT SFVNMVITSD KPEHMLITDD ECCRVLFSEA VNDGCFASEN FTQGSNVIEL  420
VGCKNMSLSQ ASDIQISETG KTAASQSNCP PRSEALPTSC CQSFLSPSLL SIEDGKHMYG  480
REPSQLTGKP IETQEQEFTK NAHDGFIYTN DDHTDNKDLQ EESYLEKDSV KLVPVNNFGL  540
ESNAVQTCPT VDDKPNLPSV QDVGGLCYGP PRFPSLDMPF FSCDLIPFGS DMQQEYSPLG  600
IRQLMMSSMN CITPFRLWDS PSRDDSPDAV LKSAAKTFTG TPSILKKRHR DLLSPLSERR  660
SDKKLETDMT SSLTEDFSRL DVMFNETGTG NISQVSPAEH KTNSGVSVEE KENLYQAFDR  720
EQENGGDHTE SLDDEAQKKD SNGTNSQRNM KMETCNSDSK DKAEADASDK IVQQHSTVLV  780
ERNLNDLLLF SPDHVGLIAD RPLLSSTIGT PINQYHKSFG AISNRGFASE CLSGNACIVV  840
SSPTLKIKNG EGHSIAVSTV QCTNSSATLE NLVDNAGTNA GIENYNIFGG TPFRRSIESP  900
SAWKSPWFIN SFVPGPRNDT EITIEDIGYL MSPADRSYDA IGLMKQLNEH TAAAYADALE  960
VLGDETPESI VKGRRSNNPK MEKENNQLEV QSHLASNILA ERRILDFSEC GTPGKGTENS  1020
KSSTAISISS PSSYLLKVVE FCVLVWSCC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein