PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754596.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 839aa    MW: 92414 Da    PI: 6.4357
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.1e-192078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022754596.1 20 KYVRYTPEQVEALERLYHDCPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP
2START184.74.8e-581643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W +++++ ++++v+s+g  g+++l 
  XP_022754596.1 164 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLDPT-RVAEILKDWPSWCRDCRSLDVINVLSTGngGTIELL 257
                     789*******************************************************.9999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022754596.1 258 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTmppAANFVRAEMLPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLY 352
                     ********************************************9999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s++  ++kt++a+l+++++
  XP_022754596.1 353 ESSTLLAQKTTMAALHHLRQ 372
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MMAVTSSCKE GNKIAMDNGK YVRYTPEQVE ALERLYHDCP KPSSMRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EATRLQAVNR KLTAMNKLLM EENDRLQKQV SHLVYENSYF  120
RQHTHNATVA TTDTSCESVV TSGQHHLTPQ HPPRDASPAG LLSIAEETLT EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIVA ISHGCPGVAA RACGLVGLDP TRVAEILKDW PSWCRDCRSL  240
DVINVLSTGN GGTIELLYMQ LYAPTTLAPA RDFWLLRYTS VLEDGSLVVC ERSLNNTQNG  300
PTMPPAANFV RAEMLPSGYL IRPCEGGGSI IHVVDHMDLE PWSVPEVLRP LYESSTLLAQ  360
KTTMAALHHL RQISQEISQP NVTGWGRRPA ALRAVSQKLS KGFNEAVNGF TDEGWSMLES  420
DGVDDVTLLV NSSPGKMMGI NLSYSNGFPS MGNAVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADSGIDA YSAAAVKAGP CSLPVSRGGS FGGQVILPLA HTIEHEEFME VIKLENMCHY  540
QEDMIMPGDI FLLQLCSGVD ENAAGSCAEL IFAPIDVSFS DNAAIIPSGF RIIPLDSGMD  600
ASSPNRTLDL ASTLEVGATR NRATADHSGR CRSTKSVMTI AFQFVYEIHL QENVATMARQ  660
YVRSIIASVQ RVALALSPSP FGSHAGFQTP PGTPEAQTLA RWICQSYRCY LGVELLKHEG  720
SESILKMLWH HIDAVLCCSL KALPVFTFAN QAGLDMLETT LVALQDISLE KIFDGNGQKA  780
LFAEFPQVMH QGFMCLQGGI CLSSMGRPVS YERAVAWKVV NDEENAHCIC FMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein