PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754773.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 1121aa MW: 125236 Da PI: 6.1627

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.6e-22	126	226	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + +++ XP_022754773.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfptldfSMQPPA-QELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR--DEK 217 99***************************9445444.38**********************************************4..466 PP E..EEEEE- CS B3 90 felvvkvfr 98 +l+++++ XP_022754773.1 218 SQLLLGIRH 226 667888875 PP
2	Auxin_resp	120.5	1.3e-39	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv+++ k++ka++++vs+GmRf+m+feteds rr++Gt++g+sdldpvrW+ S+Wr+++ XP_022754773.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLVKYNKAVYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKTSQWRNIQ 334 79******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1121 aa Download sequence
MKAPPNGFLA NSAEGERKSI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYDKEALL VSDMGLKQSR 120 QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPTLDFSMQ PPAQELVARD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRHANRQ QSALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLV KYNKAVYTQV SLGMRFRMMF 300 ETEDSGVRRY MGTITGISDL DPVRWKTSQW RNIQVGWDES TAGERPSRVS IWEIEPVVTP 360 FYICPPPFFR PRFPKQPGMP DDESDIENAF KRAMPWLGDD FGMKDAPSSF FPGLSLVQWM 420 SMQQNNQFPA AQSGFFPSMV SSNPLHNNLS TDDPSKLLNF QASVLPASNM QFNKANANQV 480 NQLPQAPMTW PQQQQLQQLL QTPLNQHQQQ QQSQQQLQQQ QPQQPQQQPQ PQPQPQPQPQ 540 PPPQQQQQQQ QQQQQQQQRQ QPQPQQQLQQ QAFLPAQVNN GIIAPDQITN QNLHLPAVYS 600 QLQPQQLLTS NSQSTQTILS ANKTLYPSTS LAQDTQIQQQ MEQQPNLIQR QQQQTQLQQS 660 PVQLLQQSLS QRTQQQPQIQ QLSQQDLSEQ QLQLQLLQKL QQQQQLSQQL LSPAGSLLQF 720 PMVQQQPTHQ QNQPLQQLPI SQIQPQPLGS NGFSTSGLMQ PQQLSMNQPQ SQIKPLMAMR 780 THSGLTDGDA PSCSTSPSTN NCQVSPSNFL NRSEQVPSIL VTDPIVEPAS TVVQELQSKP 840 DIRTKHELST SKGPDQSKYK STLTDHLEAS SSGTSYCLDA GTIQHNFSLP TFLEGDVQSH 900 PQNNLPFTAN IDGLPPDTLL SRGYDSQKDL QNLLSNYGGN PRDIDTELST AAISSQSFGV 960 PNIPFKTGCS NDVAINETGV LTGGLWPNQT QCMRTYTKVQ KRGSVGRSID VTRYKGYVEL 1020 RQDLARMFGI EGQLEDPHGS DWKLVYVDHE NDILLVGDDP WQEFLSCVQS VKILSSAEVQ 1080 QMSLDGDLGN LAVPHQACSV TDSGNAWRGH YDDTSAVSFN R

Sequence ? help Back to Top

Protein Sequence Length: 1121 aa Download sequence

MKAPPNGFLA NSAEGERKSI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYDKEALL VSDMGLKQSR  120
QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPTLDFSMQ PPAQELVARD LHDNTWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRHANRQ QSALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLV KYNKAVYTQV SLGMRFRMMF  300
ETEDSGVRRY MGTITGISDL DPVRWKTSQW RNIQVGWDES TAGERPSRVS IWEIEPVVTP  360
FYICPPPFFR PRFPKQPGMP DDESDIENAF KRAMPWLGDD FGMKDAPSSF FPGLSLVQWM  420
SMQQNNQFPA AQSGFFPSMV SSNPLHNNLS TDDPSKLLNF QASVLPASNM QFNKANANQV  480
NQLPQAPMTW PQQQQLQQLL QTPLNQHQQQ QQSQQQLQQQ QPQQPQQQPQ PQPQPQPQPQ  540
PPPQQQQQQQ QQQQQQQQRQ QPQPQQQLQQ QAFLPAQVNN GIIAPDQITN QNLHLPAVYS  600
QLQPQQLLTS NSQSTQTILS ANKTLYPSTS LAQDTQIQQQ MEQQPNLIQR QQQQTQLQQS  660
PVQLLQQSLS QRTQQQPQIQ QLSQQDLSEQ QLQLQLLQKL QQQQQLSQQL LSPAGSLLQF  720
PMVQQQPTHQ QNQPLQQLPI SQIQPQPLGS NGFSTSGLMQ PQQLSMNQPQ SQIKPLMAMR  780
THSGLTDGDA PSCSTSPSTN NCQVSPSNFL NRSEQVPSIL VTDPIVEPAS TVVQELQSKP  840
DIRTKHELST SKGPDQSKYK STLTDHLEAS SSGTSYCLDA GTIQHNFSLP TFLEGDVQSH  900
PQNNLPFTAN IDGLPPDTLL SRGYDSQKDL QNLLSNYGGN PRDIDTELST AAISSQSFGV  960
PNIPFKTGCS NDVAINETGV LTGGLWPNQT QCMRTYTKVQ KRGSVGRSID VTRYKGYVEL  1020
RQDLARMFGI EGQLEDPHGS DWKLVYVDHE NDILLVGDDP WQEFLSCVQS VKILSSAEVQ  1080
QMSLDGDLGN LAVPHQACSV TDSGNAWRGH YDDTSAVSFN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein