PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754774.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 1008aa    MW: 112888 Da    PI: 6.4299
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.11.4e-2213113198
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      +++++  ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +  +++
  XP_022754774.1  13 FCKTLTASDTSTHGGFSVPRRAAEKIfptldfSMQPPA-QELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR--DEK 104
                     99*****************************9445444.38************************************************4..466 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                      +l+++++ 
  XP_022754774.1 105 SQLLLGIRH 113
                     667888875 PP
2Auxin_resp120.71.1e-39139221183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPras+seFv+++ k++ka++++vs+GmRf+m+feteds  rr++Gt++g+sdldpvrW+ S+Wr+++
  XP_022754774.1 139 AAHAAANNSPFTIFYNPRASPSEFVIPLVKYNKAVYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKTSQWRNIQ 221
                     79******************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1008 aa     Download sequence    
MGLKQSRQPA EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP TLDFSMQPPA QELVARDLHD  60
NTWTFRHIYR GQPKRHLLTT GWSVFVSTKR LFAGDSVLFI RDEKSQLLLG IRHANRQQSA  120
LSSSVISSDS MHIGILAAAA HAAANNSPFT IFYNPRASPS EFVIPLVKYN KAVYTQVSLG  180
MRFRMMFETE DSGVRRYMGT ITGISDLDPV RWKTSQWRNI QVGWDESTAG ERPSRVSIWE  240
IEPVVTPFYI CPPPFFRPRF PKQPGMPDDE SDIENAFKRA MPWLGDDFGM KDAPSSFFPG  300
LSLVQWMSMQ QNNQFPAAQS GFFPSMVSSN PLHNNLSTDD PSKLLNFQAS VLPASNMQFN  360
KANANQVNQL PQAPMTWPQQ QQLQQLLQTP LNQHQQQQQS QQQLQQQQPQ QPQQQPQPQP  420
QPQPQPQPPP QQQQQQQQQQ QQQQQRQQPQ PQQQLQQQAF LPAQVNNGII APDQITNQNL  480
HLPAVYSQLQ PQQLLTSNSQ STQTILSANK TLYPSTSLAQ DTQIQQQMEQ QPNLIQRQQQ  540
QTQLQQSPVQ LLQQSLSQRT QQQPQIQQLS QQDLSEQQLQ LQLLQKLQQQ QQLSQQLLSP  600
AGSLLQFPMV QQQPTHQQNQ PLQQLPISQI QPQPLGSNGF STSGLMQPQQ LSMNQPQSQI  660
KPLMAMRTHS GLTDGDAPSC STSPSTNNCQ VSPSNFLNRS EQVPSILVTD PIVEPASTVV  720
QELQSKPDIR TKHELSTSKG PDQSKYKSTL TDHLEASSSG TSYCLDAGTI QHNFSLPTFL  780
EGDVQSHPQN NLPFTANIDG LPPDTLLSRG YDSQKDLQNL LSNYGGNPRD IDTELSTAAI  840
SSQSFGVPNI PFKTGCSNDV AINETGVLTG GLWPNQTQCM RTYTKVQKRG SVGRSIDVTR  900
YKGYVELRQD LARMFGIEGQ LEDPHGSDWK LVYVDHENDI LLVGDDPWQE FLSCVQSVKI  960
LSSAEVQQMS LDGDLGNLAV PHQACSVTDS GNAWRGHYDD TSAVSFNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein