PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754800.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 302aa MW: 33942 Da PI: 9.2279

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.3	1e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l +++k G g+W+ +++ g++R++k+c++rw++yl XP_022754800.1 14 RGAWTAHEDKVLTEYIKANGEGRWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022754800.1 67 RGNISADEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRSPCCSKE GLNRGAWTAH EDKVLTEYIK ANGEGRWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SADEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVQHHH 120 NSAAALKRNK SNRRVMKKSE AAQLAPTGGT SSQSHVVRTR AIRCSKVFIN PQYPQKIGPF 180 DSNRQVKPSI DWDCPTNQTS ASTPANYVVS SIAENGENDF NLSDFMLDFN MGEFCLSDLL 240 NFGFSDVGEL NYSNALSPSP DQPLSFSEEM QQDWTSSHYA QQNVGSNLHS LAPFLDNGEA 300 TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-63	MYB family protein