PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754929.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 216aa    MW: 24450.9 Da    PI: 7.4517
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.51.5e-173172243
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    + e k n +vtf+kRr+g++KKA+EL++L +a++ +i++s++
  XP_022754929.1 31 QLEKKNNLHVTFTKRRTGLFKKASELCILSGAKIGIIVLSPS 72
                    568899**********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MLNNQQKMLN KCCENKKPGK TKGRQRIEIK QLEKKNNLHV TFTKRRTGLF KKASELCILS  60
GAKIGIIVLS PSPREKPFCF GHPNIDTILD QYLNNIGNPT FDDQDYATTD LPAFEEINKQ  120
YEESLKELEK EKKRGKEMEE AKKVGNNVGF WWDIESVEGM GIEELEAYMK ATEELKDNLI  180
VRVNALTMAN VIETVAQANH GHGFGFAQNP GFGGTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-29M-type_MADS family protein