PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755153.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 247aa MW: 28764.4 Da PI: 8.1902

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEd++l+++++ +G g+W+t++++ g+ R +k+c++rw +yl XP_022755153.1 13 RGLWKPEEDLILKNYIETHGEGNWATVSKRSGLMRGGKSCRLRWKNYL 60 788*******************************************97 PP
2	Myb_DNA-binding	52.5	1.2e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022755153.1 66 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 67789***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MENNKETKAQ PKRGLWKPEE DLILKNYIET HGEGNWATVS KRSGLMRGGK SCRLRWKNYL 60 RPNIKRGGMS KEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKKSILGKR 120 KAVDSNKKQI ENEDTETLQD SKKPSQSHNS QPIFSTSPKR TTEGLDLDEK KEVKEQISVR 180 DTSWMERAVQ CFNNDYDYDM VETPVMMQPN YSNFVFDEDP FPFYLDSFVQ FEAFGTDSDV 240 GIQSFLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-68	MYB family protein