PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755376.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 345aa MW: 38516.9 Da PI: 5.2666

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +++ v ++G+g+W++++++ g +R++k+c++rw +yl XP_022755376.1 14 KGLWTEEEDAKILAHVSKHGTGNWTAVPKKAGFRRCGKSCRHRWTNYL 61 678***************************88**********97 PP
2	Myb_DNA-binding	46.3	9.5e-15	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+el++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022755376.1 68 EGFTPQEEELIIRLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MVRPPCCDKL NVKKGLWTEE EDAKILAHVS KHGTGNWTAV PKKAGFRRCG KSCRHRWTNY 60 LRPDLKREGF TPQEEELIIR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEIG 120 IDPVTHKPFS QILADYGNIG GLPKSRTQIG SLNRDMKNTF VIKPEPYPSP AAAAEGFSNI 180 NNRLMTTMAS PGMEPIQDNF MSNNSINRQA DSDSLDLLSQ LQAIKLVTEA SNYTGYQTIS 240 PPAAQEKSGI AFSWRDFLLE DAFSPADHPH GQEDHILEFP SEDNETSAEH IDNNNNNGAL 300 QGMDSEVPSY SFRASSSTDS SFVAAMLDQE NEMFSELANL LEDTD

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MVRPPCCDKL NVKKGLWTEE EDAKILAHVS KHGTGNWTAV PKKAGFRRCG KSCRHRWTNY  60
LRPDLKREGF TPQEEELIIR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEIG  120
IDPVTHKPFS QILADYGNIG GLPKSRTQIG SLNRDMKNTF VIKPEPYPSP AAAAEGFSNI  180
NNRLMTTMAS PGMEPIQDNF MSNNSINRQA DSDSLDLLSQ LQAIKLVTEA SNYTGYQTIS  240
PPAAQEKSGI AFSWRDFLLE DAFSPADHPH GQEDHILEFP SEDNETSAEH IDNNNNNGAL  300
QGMDSEVPSY SFRASSSTDS SFVAAMLDQE NEMFSELANL LEDTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	2e-73	MYB family protein