PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755632.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 845aa    MW: 92104.9 Da    PI: 5.5226
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-182885457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022755632.1 28 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 85
                    5789****************************************************97 PP
2START1556.2e-491663702201
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W + ++  e+      g  g+++l 
  XP_022755632.1 166 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQNCSGVAARACGLVSLEPT-KIAEILKDRPSWLRECRNLEVFTMFPAGngGTIELV 259
                     7899******************************************************.7777777777*******9999999998888****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     ++++ a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l+
  XP_022755632.1 260 YTQTFAPTTLAPaRDFWTLRYTTTLENGSLVVCERSLSGSGAGPSaaaAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 354
                     **************************************99999988999********************************************** PP

                     HHHHHHHHHHHHHHTX CS
           START 186 ksglaegaktwvatlq 201
                     +s+ + ++k++ a+l+
  XP_022755632.1 355 ESSKIIAQKMTIAALR 370
                     **********999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    
MAMAVAHHME SSSGSGSSIS KHLDAGKYVR YTAEQVEALE RVYAECPKPS SLRRQQLIRE  60
CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQTVNRKLN AMNKLLMEEN DRLQKQVSQL  120
VCENGYMRQQ LHTVNASATD ASCDSVVTTP QHSLRDANNP AGLLSIAEET LAEFLSKATG  180
TAVDWVQMPG MKPGPDSVGI FAISQNCSGV AARACGLVSL EPTKIAEILK DRPSWLRECR  240
NLEVFTMFPA GNGGTIELVY TQTFAPTTLA PARDFWTLRY TTTLENGSLV VCERSLSGSG  300
AGPSAAAAAQ FVRAEMLPSG YLIRPCDGGG SIIHIVDHLN LEAWSVPEVL RPLYESSKII  360
AQKMTIAALR FIRQVAQETS GEVVYGLGRQ PAVLRTFSQR LSRGFNDAIN GFNDDGWSIM  420
NCDGTEDVII AINSSKSLSS TSNPANALSF LGGVLCAKAS MLLQNVPPAV LVRFLREHRS  480
EWADFNVDAY CAASLKAGTY AYPGMRPTRF TGSQIIMPLG HTIENEELLE VIRLEGHSSA  540
LEDAFLSGDI HLLQICSGID ENAVGACSEL VFAPIDEMFP DDAPLLPSGF HIIPLESKSS  600
DTQDSLTTNR TLDLTSSLEV GPATNHAAGD APCQNTRSVL TIAFQFPFDS NLQDNVATMA  660
RQYVRSVISS VQRVAMAISP SGLSPAVGPK LSPGSPEALT LAHWICQSYS FHLGAELLKS  720
ESLDGDSVLK NLWQHQDAIL CCSMKSLPVF IFANQAGLDM LETTLVALQD ITLDKIFDES  780
GRKALCSDFA NLMEQQGFAY LPAGICMSTM GRHVSYEQAV AWKVFAADES TVHCLAFSFV  840
NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein