PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755779.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 706aa MW: 78053.1 Da PI: 8.9345

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	601	650	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022755779.1 601 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 650 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MVLQKRLDYG FNGYQVPATP RATRSARVIY FIVTKRVPFR KRVEDSQVGA FDLLATVAGK 60 LLLDKECSRA STNTSSAEDQ SGVEKTTVKE ERQDGDQSLK LETCNHESTS REFYVSELVS 120 QTNDPNYSSR ESPSLQNDAH LGFASVITSS DCSERFDAQK LMNGKIKNEM GSLPCKVETG 180 PFLCGTSGGC LKPEAENKRL KDEELHGTDK VSTGEVADTC PLEDPVVLDG KPPPLVSSDS 240 SGKLRSCGDH NPLRSFPLRR DDVNVVSRDD DEKSSGCTHP SRIKDSFRST PCIGDRRIRK 300 ILASKYWKVA SKLKDVTFSN SDENSKSGYY GRSTYKCLRS ERNYPFKKRK FLHYSSVSNS 360 DGGTSNEGIS DSPEKSINGN TASVYPKMHG VTGESSSLAD QRKSFHSRDS HVKLRIKSFR 420 VPELFIEIPE SATVGSLKRT VMEAVTAILG GGLRVGVLLQ GKKVREDNKT LLQTGISHDD 480 QMDALGFSLE PNPSQTSPLL CPGSSPLKCP CDTPLPLARH PANPGLVNQV TCDPSPEPHM 540 LNLGNFVESD HDSAPTDMSL GKNLTDSKAL VAVPAMSVEA LAAVPAHRKS KRSEVVQRRI 600 RRPFSVAEVE ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ 660 RRGEPVPQEL LDRVLTAHAY WSQHQAKQQL KPQQPETCLL LYNTPK

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MVLQKRLDYG FNGYQVPATP RATRSARVIY FIVTKRVPFR KRVEDSQVGA FDLLATVAGK  60
LLLDKECSRA STNTSSAEDQ SGVEKTTVKE ERQDGDQSLK LETCNHESTS REFYVSELVS  120
QTNDPNYSSR ESPSLQNDAH LGFASVITSS DCSERFDAQK LMNGKIKNEM GSLPCKVETG  180
PFLCGTSGGC LKPEAENKRL KDEELHGTDK VSTGEVADTC PLEDPVVLDG KPPPLVSSDS  240
SGKLRSCGDH NPLRSFPLRR DDVNVVSRDD DEKSSGCTHP SRIKDSFRST PCIGDRRIRK  300
ILASKYWKVA SKLKDVTFSN SDENSKSGYY GRSTYKCLRS ERNYPFKKRK FLHYSSVSNS  360
DGGTSNEGIS DSPEKSINGN TASVYPKMHG VTGESSSLAD QRKSFHSRDS HVKLRIKSFR  420
VPELFIEIPE SATVGSLKRT VMEAVTAILG GGLRVGVLLQ GKKVREDNKT LLQTGISHDD  480
QMDALGFSLE PNPSQTSPLL CPGSSPLKCP CDTPLPLARH PANPGLVNQV TCDPSPEPHM  540
LNLGNFVESD HDSAPTDMSL GKNLTDSKAL VAVPAMSVEA LAAVPAHRKS KRSEVVQRRI  600
RRPFSVAEVE ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ  660
RRGEPVPQEL LDRVLTAHAY WSQHQAKQQL KPQQPETCLL LYNTPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-154	MYB_related family protein