PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755781.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 699aa MW: 77217 Da PI: 8.94

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	594	643	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022755781.1 594 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 643 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MVLQKRLDYG FNGYQVPATP RATRSARKRV PFRKRVEDSQ VGAFDLLATV AGKLLLDKEC 60 SRASTNTSSA EDQSGVEKTT VKEERQDGDQ SLKLETCNHE STSREFYVSE LVSQTNDPNY 120 SSRESPSLQN DAHLGFASVI TSSDCSERFD AQKLMNGKIK NEMGSLPCKV ETGPFLCGTS 180 GGCLKPEAEN KRLKDEELHG TDKVSTGEVA DTCPLEDPVV LDGKPPPLVS SDSSGKLRSC 240 GDHNPLRSFP LRRDDVNVVS RDDDEKSSGC THPSRIKDSF RSTPCIGDRR IRKILASKYW 300 KVASKLKDVT FSNSDENSKS GYYGRSTYKC LRSERNYPFK KRKFLHYSSV SNSDGGTSNE 360 GISDSPEKSI NGNTASVYPK MHGVTGESSS LADQRKSFHS RDSHVKLRIK SFRVPELFIE 420 IPESATVGSL KRTVMEAVTA ILGGGLRVGV LLQGKKVRED NKTLLQTGIS HDDQMDALGF 480 SLEPNPSQTS PLLCPGSSPL KCPCDTPLPL ARHPANPGLV NQVTCDPSPE PHMLNLGNFV 540 ESDHDSAPTD MSLGKNLTDS KALVAVPAMS VEALAAVPAH RKSKRSEVVQ RRIRRPFSVA 600 EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP 660 QELLDRVLTA HAYWSQHQAK QQLKPQQPET CLLLYNTPK

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MVLQKRLDYG FNGYQVPATP RATRSARKRV PFRKRVEDSQ VGAFDLLATV AGKLLLDKEC  60
SRASTNTSSA EDQSGVEKTT VKEERQDGDQ SLKLETCNHE STSREFYVSE LVSQTNDPNY  120
SSRESPSLQN DAHLGFASVI TSSDCSERFD AQKLMNGKIK NEMGSLPCKV ETGPFLCGTS  180
GGCLKPEAEN KRLKDEELHG TDKVSTGEVA DTCPLEDPVV LDGKPPPLVS SDSSGKLRSC  240
GDHNPLRSFP LRRDDVNVVS RDDDEKSSGC THPSRIKDSF RSTPCIGDRR IRKILASKYW  300
KVASKLKDVT FSNSDENSKS GYYGRSTYKC LRSERNYPFK KRKFLHYSSV SNSDGGTSNE  360
GISDSPEKSI NGNTASVYPK MHGVTGESSS LADQRKSFHS RDSHVKLRIK SFRVPELFIE  420
IPESATVGSL KRTVMEAVTA ILGGGLRVGV LLQGKKVRED NKTLLQTGIS HDDQMDALGF  480
SLEPNPSQTS PLLCPGSSPL KCPCDTPLPL ARHPANPGLV NQVTCDPSPE PHMLNLGNFV  540
ESDHDSAPTD MSLGKNLTDS KALVAVPAMS VEALAAVPAH RKSKRSEVVQ RRIRRPFSVA  600
EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP  660
QELLDRVLTA HAYWSQHQAK QQLKPQQPET CLLLYNTPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-156	MYB_related family protein