PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755782.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 766aa    MW: 85015.4 Da    PI: 6.0869
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.75.8e-1153937631373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+a+ss+d   a++l++++++++sp+gd  qRla++f+ AL+arla++++++y +l ++++s    ++ l+a+ ++  ++P++k+s 
  XP_022755782.1 393 LRTLLILCAQAISSDDSVTANELIKQIRQHSSPSGDGSQRLAHFFVDALEARLAGTGTQIYTSLGAKRAS---AADMLKAYYVYLSACPFMKMSI 484
                     5789************************************************************999998...8********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       a + Il+ +e+++++HiiDf+i +G+QWp+L++ La+Rp+gpp+lRiTg++ p+ g   +e ++etg+rLa+++e+ +vpfe+n+ +a+++e+
  XP_022755782.1 485 CFAKNNILKVAEKATTLHIIDFGIFNGFQWPTLIHHLANRPGGPPKLRITGIEFPQRGfrPAEGVQETGHRLARYCERYNVPFEYNA-IAQKWET 578
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E++aVn+ ++ ++llde+v l+s+rd+vL+l++++ P+++v++  + ++n++ F++rf eal ++salfd+ e+ +p+e++ r 
  XP_022755782.1 579 VRTEDLKINSNEVIAVNCLFRFKYLLDETVVLNSPRDTVLNLIRKIHPDIFVHSVVNGSYNAPFFVTRFREALFHFSALFDMCETVVPHEDHMRP 673
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++ grei+n++aceg+er+er e++++Wr r   aGF+++pl+ + +k+++  +++++   + v+ + g++++gWk+r +++ SaW
  XP_022755782.1 674 MLEQQFYGREIMNIIACEGTERVERPESYKQWRVRNLGAGFTQLPLDAELMKKVRDKVKECYHSDFVVDVDGGWMLQGWKGRIIYASSAW 763
                     **************************************************************777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    
MGSQFNGFPN SVTGFKFDSE YILPNSNEYP KFEISSGVRS NGQSLDFSSI GVPFLPSLGL  60
DNSSTSPSFL SMAKEGDSLS PSDDSDFSDA VLKYISQVLL EEDTEGKPCM FHDSLALQAA  120
EKSLSEVLRD SYPTCNQAPL CSDRRVESPD SFSFGTPSDH STYSSSSSSS RSCSCTSNSI  180
DSLSHGDFGE NNNKPSLSQT SIPDNFVFQS TVNSGSQSSG CFQNDSANNG DELAGSSVSE  240
IAIPNYFSPS ELALHFKRGI EEASKFLPKV NQLNIDFESN AWASELKQKA PKMVVKLESD  300
GKEYSPPRLT GKKNHVREDE DLEEGRNNKQ SAVLGDESEL SDMFDKMLIC DGRKGQSSPT  360
CTANKALQNE PTNGSSIGKA RGKKQGKKKA VDLRTLLILC AQAISSDDSV TANELIKQIR  420
QHSSPSGDGS QRLAHFFVDA LEARLAGTGT QIYTSLGAKR ASAADMLKAY YVYLSACPFM  480
KMSICFAKNN ILKVAEKATT LHIIDFGIFN GFQWPTLIHH LANRPGGPPK LRITGIEFPQ  540
RGFRPAEGVQ ETGHRLARYC ERYNVPFEYN AIAQKWETVR TEDLKINSNE VIAVNCLFRF  600
KYLLDETVVL NSPRDTVLNL IRKIHPDIFV HSVVNGSYNA PFFVTRFREA LFHFSALFDM  660
CETVVPHEDH MRPMLEQQFY GREIMNIIAC EGTERVERPE SYKQWRVRNL GAGFTQLPLD  720
AELMKKVRDK VKECYHSDFV VDVDGGWMLQ GWKGRIIYAS SAWIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein