PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755783.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 780aa    MW: 87722.3 Da    PI: 4.9156
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.35.1e-1134007741373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+avs++d + a +lL++++e++sp gd +qRla++f+++L+arl +s++ + +  ++ ++++++ ++ l+a+k +  ++P+ k+  
  XP_022755783.1 400 LRTLLILCAQAVSADDRRTAGELLKQIKEHSSPLGDGTQRLAHFFANGLEARLDGSGTIIQSFHASLASNKTTAADILKAYKGYLCACPFKKLPI 494
                     5789***************************************************888888877888888888********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++I   +e+++++Hi+Df+i++G+QWp L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rLak++e+++vpfe+n ++a+++e+
  XP_022755783.1 495 FFANKMICHMAEKASALHIVDFGIGYGFQWPILIQHLSKRAGGPPKLRITGIEIPQHGfrPTERIEETGRRLAKYCERFNVPFEYNCIAAQNWEK 589
                     *********************************************************9************************************* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++ +++++++E+laVn+ ++ ++llde+++++ +r++vLkl+++++P+++v++  + ++ns+ F++rf eal + sa+fd++e++l+re+ +r 
  XP_022755783.1 590 IQIVDIKIDSNEMLAVNSLFRFENLLDETAEVDCPRNAVLKLIRKMNPDIFVHSIVNGSYNSPFFVTRFKEALFHLSAIFDMFENTLGREEPARL 684
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + Ere+ gr++vnvvaceg++r++r et+++W+ r+++aGFk +pl+++ +k+++  l++ + + + ++e+++++++gWk+r L++ S+W
  XP_022755783.1 685 MFEREFYGRDAVNVVACEGSARVQRPETYKQWQIRMRRAGFKLLPLDQELMKTVRGKLKTWYHKDFVIDEDNHWMLQGWKGRILYASSCW 774
                     **************************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MDPKFTDFSD YSNGFKAEDD TFQLNSGQYL NFTNGFEFNV PSPDLNFMNI NVPVIPPEPD  60
PGFFVPSVTV SSDGSSFSAS TSWTPEGESA SPSDDSESTD PVLKYISLML MEENMEDKPY  120
MLNDYLALED TEKSLYEVLG EQYPPTNQPQ PFLNLNMESP DSNLSGSSSD YGSNGHSSTS  180
ISTSNGTSNY IDHQGVGEVR EPASSLLQSP LSGDYYFQPS SQFSVNSTSS LSNMGNGQME  240
SSVRELLVQN IFSDKESVLQ FQRGFEEASK FLPSSNQLII DLESNSFPVG QKGKVPNVAV  300
KVEKDEKENS PDGSRGRKNH ARDDGDLEEE RSNKQSATYT EEIDLSEMFD KVLLCSEENA  360
MCGMNATESK TFQRKEQSNG SSVGKTRSKK QGKEKETVDL RTLLILCAQA VSADDRRTAG  420
ELLKQIKEHS SPLGDGTQRL AHFFANGLEA RLDGSGTIIQ SFHASLASNK TTAADILKAY  480
KGYLCACPFK KLPIFFANKM ICHMAEKASA LHIVDFGIGY GFQWPILIQH LSKRAGGPPK  540
LRITGIEIPQ HGFRPTERIE ETGRRLAKYC ERFNVPFEYN CIAAQNWEKI QIVDIKIDSN  600
EMLAVNSLFR FENLLDETAE VDCPRNAVLK LIRKMNPDIF VHSIVNGSYN SPFFVTRFKE  660
ALFHLSAIFD MFENTLGREE PARLMFEREF YGRDAVNVVA CEGSARVQRP ETYKQWQIRM  720
RRAGFKLLPL DQELMKTVRG KLKTWYHKDF VIDEDNHWML QGWKGRILYA SSCWLPAQEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein