PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755784.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 733aa    MW: 82317.6 Da    PI: 5.1805
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.54.3e-1133537271373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+avs++d + a +lL++++e++sp gd +qRla++f+++L+arl +s++ + +  ++ ++++++ ++ l+a+k +  ++P+ k+  
  XP_022755784.1 353 LRTLLILCAQAVSADDRRTAGELLKQIKEHSSPLGDGTQRLAHFFANGLEARLDGSGTIIQSFHASLASNKTTAADILKAYKGYLCACPFKKLPI 447
                     5789***************************************************888888877888888888********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++I   +e+++++Hi+Df+i++G+QWp L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rLak++e+++vpfe+n ++a+++e+
  XP_022755784.1 448 FFANKMICHMAEKASALHIVDFGIGYGFQWPILIQHLSKRAGGPPKLRITGIEIPQHGfrPTERIEETGRRLAKYCERFNVPFEYNCIAAQNWEK 542
                     *********************************************************9************************************* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++ +++++++E+laVn+ ++ ++llde+++++ +r++vLkl+++++P+++v++  + ++ns+ F++rf eal + sa+fd++e++l+re+ +r 
  XP_022755784.1 543 IQIVDIKIDSNEMLAVNSLFRFENLLDETAEVDCPRNAVLKLIRKMNPDIFVHSIVNGSYNSPFFVTRFKEALFHLSAIFDMFENTLGREEPARL 637
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + Ere+ gr++vnvvaceg++r++r et+++W+ r+++aGFk +pl+++ +k+++  l++ + + + ++e+++++++gWk+r L++ S+W
  XP_022755784.1 638 MFEREFYGRDAVNVVACEGSARVQRPETYKQWQIRMRRAGFKLLPLDQELMKTVRGKLKTWYHKDFVIDEDNHWMLQGWKGRILYASSCW 727
                     **************************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    
MNINVPVIPP EPDPGFFVPS VTVSSDGSSF SASTSWTPEG ESASPSDDSE STDPVLKYIS  60
LMLMEENMED KPYMLNDYLA LEDTEKSLYE VLGEQYPPTN QPQPFLNLNM ESPDSNLSGS  120
SSDYGSNGHS STSISTSNGT SNYIDHQGVG EVREPASSLL QSPLSGDYYF QPSSQFSVNS  180
TSSLSNMGNG QMESSVRELL VQNIFSDKES VLQFQRGFEE ASKFLPSSNQ LIIDLESNSF  240
PVGQKGKVPN VAVKVEKDEK ENSPDGSRGR KNHARDDGDL EEERSNKQSA TYTEEIDLSE  300
MFDKVLLCSE ENAMCGMNAT ESKTFQRKEQ SNGSSVGKTR SKKQGKEKET VDLRTLLILC  360
AQAVSADDRR TAGELLKQIK EHSSPLGDGT QRLAHFFANG LEARLDGSGT IIQSFHASLA  420
SNKTTAADIL KAYKGYLCAC PFKKLPIFFA NKMICHMAEK ASALHIVDFG IGYGFQWPIL  480
IQHLSKRAGG PPKLRITGIE IPQHGFRPTE RIEETGRRLA KYCERFNVPF EYNCIAAQNW  540
EKIQIVDIKI DSNEMLAVNS LFRFENLLDE TAEVDCPRNA VLKLIRKMNP DIFVHSIVNG  600
SYNSPFFVTR FKEALFHLSA IFDMFENTLG REEPARLMFE REFYGRDAVN VVACEGSARV  660
QRPETYKQWQ IRMRRAGFKL LPLDQELMKT VRGKLKTWYH KDFVIDEDNH WMLQGWKGRI  720
LYASSCWLPA QEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein