PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755785.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 729aa    MW: 82358.7 Da    PI: 5.4153
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS387.41.7e-1183547233374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ ++++ a++lL+++s+++s++gd +qRla+yf++AL++rla+++   y+ l +++ts    ++ l+a+ +++ ++P+ k+s++ 
  XP_022755785.1 354 SLLTQCAQAVAINEQSTANELLKQISQHSSSSGDGTQRLAHYFANALKTRLAGMGAPSYSPLLSNRTS---AADILKAYGVYVLACPFKKMSNFY 445
                     79***************************************************999999988777777...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+e+++Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+ v +ak++e++e
  XP_022755785.1 446 ANKKIMEVAEKETTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYYV-IAKKWETIE 539
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     lee++++++E+++Vn++++l++l+d++v+ +s+rd+vLkl++s++P+++++      +n++ F +rf eal ++sa fd +ea++pre+ +r++ 
  XP_022755785.1 540 LEEIKINEDEVVVVNCMYRLKNLPDDTVAGTSARDTVLKLIRSINPELFIHGIASGTYNASFFETRFREALFHFSAQFDIFEANVPREDPQRKMF 634
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lgr+i+nvvaceg+er+er et+++W++r  +aGFk+vpl+++ ++++   ++  + + + ++ +  ++++gWk+r ++++S+W+
  XP_022755785.1 635 EKEVLGRDIMNVVACEGTERVERPETYKQWQARNLRAGFKQVPLDQELMNKVTNFVQSSYHRDFVIDVDGRWMLQGWKGRVIYALSCWK 723
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MELSSQVFLC QIGFKLSMDT IFQDLTSSMY GFKSDLDSVP VYSNHNLVNR FKESTEQIIP  60
SPTSLPTSPE SPVDSDSSSG MISSVGHPLD NVPFANEMLR YINEMLMEED LEEKTCMLQD  120
CLSLQAAEKS FYEVLGHEYP LSADPISPCT GQNYYKPDDN LTQSRSICSS NSYTTATNSV  180
EWSGIYSPSE FESSYIQTSL NDSLKRTSLV PNLQRETTME PFRHFGREIG EASKPSLSGD  240
EVNLPPQSNL STPSFLDGRY QSPSGSRGKK NYQREDGDNL EEGRSSKQSA LSLEDSEQLE  300
MFDDVLLCKG ENEDSPKCSF SGNLHQNEQL KGSKGGKTGR KKNGKKSEVV DLWSLLTQCA  360
QAVAINEQST ANELLKQISQ HSSSSGDGTQ RLAHYFANAL KTRLAGMGAP SYSPLLSNRT  420
SAADILKAYG VYVLACPFKK MSNFYANKKI MEVAEKETTL HIVDFGICYG FQWPCLIQRL  480
SARAGGPPKL RITGIEFPQP GFRPAERVEE TGRRLKRYCE RFNVPFEYYV IAKKWETIEL  540
EEIKINEDEV VVVNCMYRLK NLPDDTVAGT SARDTVLKLI RSINPELFIH GIASGTYNAS  600
FFETRFREAL FHFSAQFDIF EANVPREDPQ RKMFEKEVLG RDIMNVVACE GTERVERPET  660
YKQWQARNLR AGFKQVPLDQ ELMNKVTNFV QSSYHRDFVI DVDGRWMLQG WKGRVIYALS  720
CWKPVRNQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202207DSLKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein