PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755786.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 634aa    MW: 71987.1 Da    PI: 6.1189
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS387.91.1e-1182596283374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ ++++ a++lL+++s+++s++gd +qRla+yf++AL++rla+++   y+ l +++ts    ++ l+a+ +++ ++P+ k+s++ 
  XP_022755786.1 259 SLLTQCAQAVAINEQSTANELLKQISQHSSSSGDGTQRLAHYFANALKTRLAGMGAPSYSPLLSNRTS---AADILKAYGVYVLACPFKKMSNFY 350
                     79***************************************************999999988777777...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+e+++Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+ v +ak++e++e
  XP_022755786.1 351 ANKKIMEVAEKETTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYYV-IAKKWETIE 444
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     lee++++++E+++Vn++++l++l+d++v+ +s+rd+vLkl++s++P+++++      +n++ F +rf eal ++sa fd +ea++pre+ +r++ 
  XP_022755786.1 445 LEEIKINEDEVVVVNCMYRLKNLPDDTVAGTSARDTVLKLIRSINPELFIHGIASGTYNASFFETRFREALFHFSAQFDIFEANVPREDPQRKMF 539
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lgr+i+nvvaceg+er+er et+++W++r  +aGFk+vpl+++ ++++   ++  + + + ++ +  ++++gWk+r ++++S+W+
  XP_022755786.1 540 EKEVLGRDIMNVVACEGTERVERPETYKQWQARNLRAGFKQVPLDQELMNKVTNFVQSSYHRDFVIDVDGRWMLQGWKGRVIYALSCWK 628
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 634 aa     Download sequence    
MELSRYINEM LMEEDLEEKT CMLQDCLSLQ AAEKSFYEVL GHEYPLSADP ISPCTGQNYY  60
KPDDNLTQSR SICSSNSYTT ATNSVEWSGI YSPSEFESSY IQTSLNDSLK RTSLVPNLQR  120
ETTMEPFRHF GREIGEASKP SLSGDEVNLP PQSNLSTPSF LDGRYQSPSG SRGKKNYQRE  180
DGDNLEEGRS SKQSALSLED SEQLEMFDDV LLCKGENEDS PKCSFSGNLH QNEQLKGSKG  240
GKTGRKKNGK KSEVVDLWSL LTQCAQAVAI NEQSTANELL KQISQHSSSS GDGTQRLAHY  300
FANALKTRLA GMGAPSYSPL LSNRTSAADI LKAYGVYVLA CPFKKMSNFY ANKKIMEVAE  360
KETTLHIVDF GICYGFQWPC LIQRLSARAG GPPKLRITGI EFPQPGFRPA ERVEETGRRL  420
KRYCERFNVP FEYYVIAKKW ETIELEEIKI NEDEVVVVNC MYRLKNLPDD TVAGTSARDT  480
VLKLIRSINP ELFIHGIASG TYNASFFETR FREALFHFSA QFDIFEANVP REDPQRKMFE  540
KEVLGRDIMN VVACEGTERV ERPETYKQWQ ARNLRAGFKQ VPLDQELMNK VTNFVQSSYH  600
RDFVIDVDGR WMLQGWKGRV IYALSCWKPV RNQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112DSLKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein