PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755787.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 625aa    MW: 70850.9 Da    PI: 6.2799
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3881.1e-1182506193374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ ++++ a++lL+++s+++s++gd +qRla+yf++AL++rla+++   y+ l +++ts    ++ l+a+ +++ ++P+ k+s++ 
  XP_022755787.1 250 SLLTQCAQAVAINEQSTANELLKQISQHSSSSGDGTQRLAHYFANALKTRLAGMGAPSYSPLLSNRTS---AADILKAYGVYVLACPFKKMSNFY 341
                     79***************************************************999999988777777...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+e+++Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+ v +ak++e++e
  XP_022755787.1 342 ANKKIMEVAEKETTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYYV-IAKKWETIE 435
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     lee++++++E+++Vn++++l++l+d++v+ +s+rd+vLkl++s++P+++++      +n++ F +rf eal ++sa fd +ea++pre+ +r++ 
  XP_022755787.1 436 LEEIKINEDEVVVVNCMYRLKNLPDDTVAGTSARDTVLKLIRSINPELFIHGIASGTYNASFFETRFREALFHFSAQFDIFEANVPREDPQRKMF 530
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lgr+i+nvvaceg+er+er et+++W++r  +aGFk+vpl+++ ++++   ++  + + + ++ +  ++++gWk+r ++++S+W+
  XP_022755787.1 531 EKEVLGRDIMNVVACEGTERVERPETYKQWQARNLRAGFKQVPLDQELMNKVTNFVQSSYHRDFVIDVDGRWMLQGWKGRVIYALSCWK 619
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    
MLMEEDLEEK TCMLQDCLSL QAAEKSFYEV LGHEYPLSAD PISPCTGQNY YKPDDNLTQS  60
RSICSSNSYT TATNSVEWSG IYSPSEFESS YIQTSLNDSL KRTSLVPNLQ RETTMEPFRH  120
FGREIGEASK PSLSGDEVNL PPQSNLSTPS FLDGRYQSPS GSRGKKNYQR EDGDNLEEGR  180
SSKQSALSLE DSEQLEMFDD VLLCKGENED SPKCSFSGNL HQNEQLKGSK GGKTGRKKNG  240
KKSEVVDLWS LLTQCAQAVA INEQSTANEL LKQISQHSSS SGDGTQRLAH YFANALKTRL  300
AGMGAPSYSP LLSNRTSAAD ILKAYGVYVL ACPFKKMSNF YANKKIMEVA EKETTLHIVD  360
FGICYGFQWP CLIQRLSARA GGPPKLRITG IEFPQPGFRP AERVEETGRR LKRYCERFNV  420
PFEYYVIAKK WETIELEEIK INEDEVVVVN CMYRLKNLPD DTVAGTSARD TVLKLIRSIN  480
PELFIHGIAS GTYNASFFET RFREALFHFS AQFDIFEANV PREDPQRKMF EKEVLGRDIM  540
NVVACEGTER VERPETYKQW QARNLRAGFK QVPLDQELMN KVTNFVQSSY HRDFVIDVDG  600
RWMLQGWKGR VIYALSCWKP VRNQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198103DSLKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein