PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755789.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 693aa    MW: 78286.3 Da    PI: 5.6203
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.21.2e-1163186873374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ +d++  ++lL+++s+++s++gd +qRla+yf++AL +rla+++   y+ l +s+ts    ++ l+a+ ++  ++P+ k+s++ 
  XP_022755789.1 318 SLLTQCAQAVAINDQRTGNELLKQISQHSSSSGDGTQRLAHYFANALMTRLAGMGAPSYSPLLSSRTS---AADILKAYGVYALACPFKKMSNFY 409
                     79*********************************************************999888887...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +++e+ +Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+ v +ak++e++e
  XP_022755789.1 410 ANKKIMEVAKKETSIHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYYV-IAKKWETIE 503
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     lee++++++E+++Vn++++l++l+d++v  +s+rd+vLkl++s++P+++++      +n++ F++rf eal ++sa fd +ea++pre+ +r++ 
  XP_022755789.1 504 LEEIKINEDEVVVVNCMYRLKNLPDDTVVGTSARDTVLKLIRSINPELLIHGIASGTYNAPFFVTRFREALFHFSAQFDIFEANVPREDPQRKMF 598
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lgr+i+nvvaceg+er+er et+++W++r  +aGFk+vpl+++ ++++   ++  + + + ++ +  ++++gWk+r ++++S+W+
  XP_022755789.1 599 EKEILGRDIMNVVACEGTERVERPETYKQWQARTLRAGFKQVPLDQELMNKVTNFVQSSYHRDFLIDVDGRWVLQGWKGRVIYALSCWK 687
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    
MYGFKSDNDS VPMYSNHNLV NGFKESIEQN FPSPPSLPSS PESPVDSDSS SGTSSVGHPL  60
DNVPFANEML KYINEMLMEE DLEEKTCMLQ DCLALQAAEK SFYEVLGHEY PLSADPISPC  120
TGQNCYKPDD NLSQSRSICS SINYTTATNS VEWSGIYSPG EFESSYIQTS LIDSLERTSL  180
VPNLQRETTI EPFRHFRSEI GEASKPSLIG DKVNLAPESN LSTPSVPNGR YQSPLGSRGR  240
KNYQREDDDH LEEGRSSKQS ALSLEDSEQS EMFDDLLLCK GENEDSPKCS LYGNYQQNGQ  300
LKGLKKKGKK SEVVDLWSLL TQCAQAVAIN DQRTGNELLK QISQHSSSSG DGTQRLAHYF  360
ANALMTRLAG MGAPSYSPLL SSRTSAADIL KAYGVYALAC PFKKMSNFYA NKKIMEVAKK  420
ETSIHIVDFG ICYGFQWPCL IQRLSARAGG PPKLRITGIE FPQPGFRPAE RVEETGRRLK  480
RYCERFNVPF EYYVIAKKWE TIELEEIKIN EDEVVVVNCM YRLKNLPDDT VVGTSARDTV  540
LKLIRSINPE LLIHGIASGT YNAPFFVTRF REALFHFSAQ FDIFEANVPR EDPQRKMFEK  600
EILGRDIMNV VACEGTERVE RPETYKQWQA RTLRAGFKQV PLDQELMNKV TNFVQSSYHR  660
DFLIDVDGRW VLQGWKGRVI YALSCWKPLR NQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein