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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022755793.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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| Family | WRKY | ||||||||
| Protein Properties | Length: 288aa MW: 32631.9 Da PI: 6.7654 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 23.7 | 9.3e-08 | 58 | 79 | 2 | 23 |
--SS-EEEEEEE--TT-SS-EE CS
WRKY 2 dDgynWrKYGqKevkgsefprs 23
dDg++WrK+G Ke+ gs++pr
XP_022755793.1 58 DDGFSWRKFGLKEILGSKYPRT 79
8*******************96 PP
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| 2 | WRKY | 78.9 | 5.6e-25 | 175 | 235 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg++WrKY qKe+ gs++prsYY C s gC ++k+v+rs+++p+++e+tY+g+H+++
XP_022755793.1 175 DDGFSWRKYEQKEILGSKYPRSYYWCISGnaqGCLAQKQVQRSDDNPTIFEMTYHGRHTCT 235
8*************************8755679**************************96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 288 aa Download sequence |
MSESPPPCIG GTPLSEVYDC DFKEQELKDD SKKRKIVSRL KELIRVTHGT RVKGPPDDDG 60 FSWRKFGLKE ILGSKYPRTI GKSRPRNLFC MFHVLESISM LNCNTSLVAK PQPSEQAIRM 120 PESQPPRVGS TPRSEVHDCD FEEQELKDDS KERKTLLRLA ELIRVPSTSL EVSPDDGFSW 180 RKYEQKEILG SKYPRSYYWC ISGNAQGCLA QKQVQRSDDN PTIFEMTYHG RHTCTLGSHV 240 VPFLGPLENQ DQETFYASPK ISGITYCSTS PSPSPSGMNP IMQEDIDF |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 27 | 35 | LKDDSKKRK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G11070.2 | 5e-33 | WRKY family protein | ||||




