PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755863.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 307aa    MW: 34351.5 Da    PI: 9.8488
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-082873346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT  E + + +a +++ ++   +W ++a++++ g+t  +++  ++ 
   XP_022755863.1 28 KWTSAENKMFENALALHDKDspdRWQKVAAMIP-GKTVGDVIKQYRE 73
                     8********************************.******9999986 PP
2Myb_DNA-binding46.68e-15135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +   Rt+ q+ s+ qky
   XP_022755863.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVSRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKWEMEILSP TSYHSSTNWF LEDSKSTKWT SAENKMFENA LALHDKDSPD RWQKVAAMIP  60
GKTVGDVIKQ YRELEADVSS IEAGLVPIPG YSTSPFTLDW VNSRGYDGLK QSYGLGGKRS  120
SSGRPAEQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVSRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNLNDTRTPS PDNKGIPSSE QSSGLPQQLT SAAMPRTHLQ  240
WNQPCSGATV AFNSTQGNMS MSSPYGIPAY GLKMQMQNLH RSAAHESYFG PQNLVFQMQS  300
AQQYPHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-109MYB_related family protein