PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756051.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 183aa    MW: 20488 Da    PI: 7.443
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY231.32.4e-7121572170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     +++ +se+vCyv+CnfCntilavsvP tslf++vtvrCGhC++llsvn+ ++ q+++ ++         ++++ ++++++l++   +++ + ++ 
  XP_022756051.1   2 SLDLASERVCYVHCNFCNTILAVSVPCTSLFNIVTVRCGHCANLLSVNMGTSLQTIPIQDA--------QKQQINTDQDHLNKECGSSS-ECNKF 87 
                     567799***************************************************9996........34444444444444333222.22233 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     s+    ++ ++e+pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  XP_022756051.1  88 SA---FDSAEDEAPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 157
                     33...35677899**999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSLDLASERV CYVHCNFCNT ILAVSVPCTS LFNIVTVRCG HCANLLSVNM GTSLQTIPIQ  60
DAQKQQINTD QDHLNKECGS SSECNKFSAF DSAEDEAPRM PPIRPPEKRQ RVPSAYNRFI  120
KEEIQRIKAS NPDISHREAF STAAKNWAHF PHIHFGLKLD GNKQAKLDQA FADQGTQNSN  180
GYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.13e-87YABBY family protein