PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756053.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 176aa    MW: 19698.1 Da    PI: 8.4932
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1892.3e-581615023170
           YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117
                      vsvP tslf++vtvrCGhC++llsvn+ ++ q+++ ++         ++++ ++++++l++   +++ + ++ s+    ++ ++e+pr+pp ir
  XP_022756053.1  16 KVSVPCTSLFNIVTVRCGHCANLLSVNMGTSLQTIPIQDA--------QKQQINTDQDHLNKECGSSS-ECNKFSA---FDSAEDEAPRMPP-IR 97 
                     69**********************************9996........34444444444444333222.2223333...35677899**999.9* PP

           YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     PPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  XP_022756053.1  98 PPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 150
                     ***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MTRATGGHYL GFFQVKVSVP CTSLFNIVTV RCGHCANLLS VNMGTSLQTI PIQDAQKQQI  60
NTDQDHLNKE CGSSSECNKF SAFDSAEDEA PRMPPIRPPE KRQRVPSAYN RFIKEEIQRI  120
KASNPDISHR EAFSTAAKNW AHFPHIHFGL KLDGNKQAKL DQAFADQGTQ NSNGYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-71YABBY family protein