PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756064.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 240aa MW: 27345.3 Da PI: 6.7308

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	8.8e-09	24	70	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT +d+l+ +a +++ + +W +Ia++++ g++ ++k+++ ++ XP_022756064.1 24 QWTRLDDKLFEQALVMFPEEsfdRWQKIAERVP-GKSSSEVKEHYDML 70 6***************99*********.********9665 PP
2	Myb_DNA-binding	47.2	5.2e-15	123	167	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky XP_022756064.1 123 PWTEEEHKLFLIGLHKFGKGDWRSISRNVVVTRTPTQVASHAQKY 167 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MYQDNNSNPF LSQSSTRVLT TQTQWTRLDD KLFEQALVMF PEESFDRWQK IAERVPGKSS 60 SEVKEHYDML LYDVYEIDSG RVEIPSYADD STVLSAGWDS DNQISFTSKS KQHVENERKK 120 GTPWTEEEHK LFLIGLHKFG KGDWRSISRN VVVTRTPTQV ASHAQKYFLR QSSVKKERKR 180 SSIHDITTVD SSTMDAPVDQ NWVSVPGGSV QQLPALQQSH PVSHSVQGGS LGYQNYGFPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	4e-82	MYB family protein