PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756159.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 518aa MW: 58255.6 Da PI: 6.6566

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.2e-18	28	83	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le++++++r ps e++++LA ++gLte+q++ WF+ rR k+k+ XP_022756159.1 28 KKRTLKTPAQVTALESFYKEHRFPSDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 83 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MQICSCLCFY NSGEVQTKEN KVSLDVFKKR TLKTPAQVTA LESFYKEHRF PSDEMKAQLA 60 VQIGLTEKQI SSWFCHRRLK DKRRDESYAN GRQDHSSGVI QDRGSGLRQD SCGSIKQGDY 120 RNIDPREVES QRIYGQDFPA ADLKYERRSH QNPHDAQMED TSSESSLSLH DQLFSENRDP 180 YDMQNSAKLA ENGAIMQINP RSAKSMGYKP SGYLKVKGGN ENPAITAVKR QLGRHYQEEG 240 PLLGIEFDPL PPGAFEFPSS NPVNEPIYDG DPQQTHSPDI SGVIKLPNLN ITNEVHNSKM 300 SSQDSHMEGA NEIQDRKSHH QLKYKSSFLC PNPFPGQNSS SDIYNSSAEK TAVSDCKQSL 360 MSSKLAVERM GSDSSSNHPG PYCWKIANEH EKPWLHDDDS HTYKVPKNEN LSRTSNLIRG 420 CSESLVTERG PFVRMAKVEK LDGEWKPNKE YPVRVKIDPT NEMRVAKGIN VQFPQQDFVA 480 NASHARLPLL TNQTRGSSMD VPSSFSEDET AETSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MQICSCLCFY NSGEVQTKEN KVSLDVFKKR TLKTPAQVTA LESFYKEHRF PSDEMKAQLA  60
VQIGLTEKQI SSWFCHRRLK DKRRDESYAN GRQDHSSGVI QDRGSGLRQD SCGSIKQGDY  120
RNIDPREVES QRIYGQDFPA ADLKYERRSH QNPHDAQMED TSSESSLSLH DQLFSENRDP  180
YDMQNSAKLA ENGAIMQINP RSAKSMGYKP SGYLKVKGGN ENPAITAVKR QLGRHYQEEG  240
PLLGIEFDPL PPGAFEFPSS NPVNEPIYDG DPQQTHSPDI SGVIKLPNLN ITNEVHNSKM  300
SSQDSHMEGA NEIQDRKSHH QLKYKSSFLC PNPFPGQNSS SDIYNSSAEK TAVSDCKQSL  360
MSSKLAVERM GSDSSSNHPG PYCWKIANEH EKPWLHDDDS HTYKVPKNEN LSRTSNLIRG  420
CSESLVTERG PFVRMAKVEK LDGEWKPNKE YPVRVKIDPT NEMRVAKGIN VQFPQQDFVA  480
NASHARLPLL TNQTRGSSMD VPSSFSEDET AETSSSLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	85	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	3e-88	HB-other family protein