PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756264.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 325aa MW: 35928 Da PI: 4.9342

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++ G g+W+ +ar g+ R++k+c++rw +yl XP_022756264.1 28 KGLWSPEEDDKLINYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 75 678*******************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	81	124	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ lG++ W+ Ia++++ gRt++++k++w++ XP_022756264.1 81 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 124 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MMRKPDPSVK GSNGGGNNSN GTTNKLRKGL WSPEEDDKLI NYMLTNGQGC WSDVARNAGL 60 QRCGKSCRLR WINYLRPDLK RGAFSPQEEE LIIHLHSILG NRWSQIAARL PGRTDNEIKN 120 FWNSTIKKRL KNLPSTSSPN ASDSSTSEPS KAALAGFMSM QEQGILPMYM DLSSTSSNSS 180 LQSMVLNHTG NSLPMLEQGL NVYGATGYFN QASCVTQVGV NGDSFYAENE IFGSVDNGVE 240 RELYVPPLES IGENLKTENT FDRNINDPFT LINSSSGNNN NNRSENIASV AVGNFWLGEE 300 LKVGEWDLED LMKDVSSFPF LDFQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	1e-74	MYB family protein