PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756343.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 318aa MW: 35892.1 Da PI: 6.7357

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	114	165	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + + + a+i+ A+e++k+L+ XP_022756343.1 114 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVHRGDQASIVGGAIEFVKELE 165 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MSYYLEVYFV EIVEKMALET LSSNELLNFV IYDTISGTPY SSHDSLVTKC SLENSFSYQE 60 QASSALNCLS MMTPQCHSTG AETVDRRPNL AAQGRKKRRR KARVCKDKEE AETQRMTHIA 120 VERNRRKQMN EHLAVLRSLM PESYVHRGDQ ASIVGGAIEF VKELEHLLQT LEAQKLRVLH 180 QVRPADANEL ETTNSILLSP PFPQFFMYPQ YTWSQIPNKY TSKTKASIAD IEVTLIETHA 240 NLRILSRKGP RLLSKIVTGF ESLYLSILHL NVITVDPLVL YSISAKVEEG CQLSSVDDIA 300 GAVHHMLGII EEDATALC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	101	RKKRRRK
2	96	101	KKRRRK
3	115	126	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46690.1	5e-64	bHLH family protein