PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756352.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 364aa MW: 40117.9 Da PI: 6.5637

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	55.1	1e-17	254	288	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l XP_022756352.1 254 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 288 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MEAPQFFQGS SYCSQFAPDK PAAGDRFIVE DLLDFSNEDA IITDSIFDSS VVGHSTDSST 60 VTAVDSCNSL SFSGCEPNFA GDIGCRGFTD GHFAGDLYVP IDDLAELEWL SNFVEESFSS 120 EDLQKLQLIS GMKTLPDESS KTRGFQPVLL SQMNSVIDNC DSNRGNNKNN PIFHPDMSVP 180 ANVRSKLSRA APCNWASRLL VLSPTTSSSD PEILVPVQPP LPNYPGKKPV KTTSSKKKDG 240 CEGGGLANSD GRKCLHCATD KTPQWRTGPM GPKTLCNACG VRYKSGRLVP EYRPAASPTF 300 VLTKHSNSHR KVLELRRQKE LARAQQKHQQ QFMQHHHHNM AFDESNGDDY LIQQHVGPDF 360 RHLI

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MEAPQFFQGS SYCSQFAPDK PAAGDRFIVE DLLDFSNEDA IITDSIFDSS VVGHSTDSST  60
VTAVDSCNSL SFSGCEPNFA GDIGCRGFTD GHFAGDLYVP IDDLAELEWL SNFVEESFSS  120
EDLQKLQLIS GMKTLPDESS KTRGFQPVLL SQMNSVIDNC DSNRGNNKNN PIFHPDMSVP  180
ANVRSKLSRA APCNWASRLL VLSPTTSSSD PEILVPVQPP LPNYPGKKPV KTTSSKKKDG  240
CEGGGLANSD GRKCLHCATD KTPQWRTGPM GPKTLCNACG VRYKSGRLVP EYRPAASPTF  300
VLTKHSNSHR KVLELRRQKE LARAQQKHQQ QFMQHHHHNM AFDESNGDDY LIQQHVGPDF  360
RHLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25830.1	1e-89	GATA family protein