PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756357.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 307aa MW: 33829.7 Da PI: 5.9001

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ +v+ +G+g +W + +++ g++R++k+c++rw++yl XP_022756357.1 14 RGPWSPEEDATLKTYVETHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	45.7	1.5e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + q+G++ W++Ia+ ++ gRt++++k++w++ XP_022756357.1 69 GGFTEEEDNIICTLYSQMGSR-WSLIASQLP-GRTDNEVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGRAPCCDKA NVRRGPWSPE EDATLKTYVE THGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIC TLYSQMGSRW SLIASQLPGR TDNEVKNYWN TKLKKKLLSG 120 KSSFNNNGFV PANTNIPPQQ AASQPCLPKA ETYNLDCSTS QSHISTPLSI STDVGYGFSV 180 ISTQNLPLDP VMDFSGPEAI THLSQSRATL ANSHIVTSSH EQAGIWDSTF LDTELKSASM 240 PGNGYAEDTG NILMDQFSFE FPYEFVNGIW SQEKTGEVVP SCYDGLADFS HADVKPQGLN 300 ESVANRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-70	MYB family protein