PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756428.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 293aa MW: 32680.8 Da PI: 8.2621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l +++k +G g W+ +++ g++R++k+c++rw++yl XP_022756428.1 14 RGAWTAHEDKVLTEYIKAHGEGGWRDLPNRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022756428.1 67 RGNISVDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 788999**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGRSPCCSKE GLNRGAWTAH EDKVLTEYIK AHGEGGWRDL PNRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SVDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVQCHL 120 NSAAASKQNK SNGRFMKKSE AAQLAPTGGT SSQSHVVRTR AIKCSKVFIN PQYPQKIGPF 180 DSNREAKPSM DWDCPMNQTS ASTPANYVVS SIAENEEKDF NLSDLMLDFN MGEFCLSDLQ 240 NSGFCDVGEL NYSNALSPSP DQPLIFSEEM LQDWTSSHSA QQNAGSNLHC LAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	2e-63	MYB family protein