PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756440.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 258aa    MW: 28621.4 Da    PI: 10.4639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.1e-1499143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022756440.1  99 PWTEEEHRIFLLGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTT YRATVVGGLR LFGVQLDISS SSVAMKKSFS MDCLSSASPS  60
SPSPSSSRVS MDENSDKTSI GYLSDGLMCQ SPERKKGVPW TEEEHRIFLL GLEKLGKGDW  120
RGISRNFVTT RTPTQVASHA QKYFLRQATL NKKNRRSSLF DMVRSSRMVG THVNSSNSLI  180
SHTIPQLGLH HHYHRHHHPI PVNLQHDFTD SQTKISNAAQ PMSSNVAPDL ELTLAAPRPL  240
EENKSSPTTF LIRPIRVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-59MYB_related family protein