PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756488.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

YABBY

Protein Properties

Length: 169aa MW: 19180.7 Da PI: 8.0665

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	203.1	1.1e-62	7	158	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ + + ++++ +++ ++++ +++ s+ XP_022756488.1 7 VVPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDI---QAPNYVTQDYRTDL-------GSSSKCNSKFSMR 91 579******************************************99999998884...33333333333322.......2222222222222 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s++ +ee v+rPPekrqrvPsayn+fi+eeiqrika+nPdishreafs+aaknWahfP+ihfgl XP_022756488.1 92 APSNHATEER----VVNRPPEKRQRVPSAYNQFIREEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 158 2233333333....489**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MSSFIDVVPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDIQAPNYV TQDYRTDLGS SSKCNSKFSM RAPSNHATEE RVVNRPPEKR QRVPSAYNQF 120 IREEIQRIKA NNPDISHREA FSTAAKNWAH FPHIHFGLML ETNNQTKLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	2e-91	YABBY family protein